INSECT 2.0: A web-server for genome-wide cis-regulatory modules prediction

INSECT is a user-friendly web server to predict the occurrence of Cis-Regulatory Modules (CRMs), which control gene expression. Here, we present a new release of INSECT which includes several new features, such as whole genome analysis, nucleosome occupancy predictions, and which provides additional...

Descripción completa

Guardado en:

Detalles Bibliográficos
Publicado:	2016
Materias:	transcription factor algorithm binding site computer simulation genome Internet regulatory sequence Algorithms Binding Sites Computer Simulation Genome Regulatory Elements, Transcriptional Transcription Factors
Acceso en línea:	https://bibliotecadigital.exactas.uba.ar/collection/paper/document/paper_13674803_v32_n8_p1229_Parra http://hdl.handle.net/20.500.12110/paper_13674803_v32_n8_p1229_Parra
Aporte de:	Biblioteca Digital - Facultad de Ciencias Exactas y Naturales (UBA) de Universidad de Buenos Aires

Ejemplares similares

INSECT 2.0: A web-server for genome-wide cis-regulatory modules prediction
por: Parra, R.G., et al.

INSECT: IN-silico SEarch for Co-occurring Transcription factors
Publicado: (2013)

INSECT: IN-silico SEarch for Co-occurring Transcription factors
por: Rohr, C.O., et al.

Multiple binding sites for transcriptional repressors can produce regular bursting and enhance noise suppression
Publicado: (2017)

Multiple binding sites for transcriptional repressors can produce regular bursting and enhance noise suppression
por: Lengyel, I.M., et al.

Exaptation of transposable elements into novel Cis-regulatory elements: Is the evidence always strong?
por: Rubinstein, Marcelo
Publicado: (2013)

Exaptation of transposable elements into novel Cis-regulatory elements: Is the evidence always strong?
por: De Souza, F.S.J., et al.

Drosophila genome-wide RNAi screen identifies multiple regulators of HIF-dependent transcription in hypoxia
por: Dekanty, Andrés, et al.
Publicado: (2010)

Drosophila genome-wide RNAi screen identifies multiple regulators of HIF-dependent transcription in hypoxia
por: Dekanty, A., et al.
Publicado: (2010)

Drosophila genome-wide RNAi screen identifies multiple regulators of HIF-dependent transcription in hypoxia
por: Dekanty, A., et al.

Drosophila genome-wide RNAi screen identifies multiple regulators of HIF-dependent transcription in hypoxia
por: Dekanty, A., et al.
Publicado: (2010)

Thermodynamics of cooperative DNA recognition at a replication origin and transcription regulatory site
Publicado: (2010)

Thermodynamics of cooperative DNA recognition at a replication origin and transcription regulatory site
por: Dellarole, M., et al.

Retroviral-like features in the monomer of the major satellite DNA from the south american rodents of the genus ctenomys
por: Rossi, Maria Susana, et al.
Publicado: (1993)

Retroviral-like features in the monomer of the major satellite DNA from the south american rodents of the genus ctenomys
por: Rossi, M.S., et al.

How long should a system be observed to obtain reliable concentration estimates from the measurement of fluctuations?
Publicado: (2014)

How long should a system be observed to obtain reliable concentration estimates from the measurement of fluctuations?
por: Ipiña, E.P., et al.

Evolving Genital Structures: A Deep Look at Network Co-option
por: Frankel, Nicolás
Publicado: (2015)

Evolving Genital Structures: A Deep Look at Network Co-option
por: Preger-Ben Noon, E., et al.

Efficiency and precision of microRNA biogenesis modes in plants
por: Moro, Belén, et al.
Publicado: (2021)

Integration host factor is involved in transcriptional regulation of the Brucella abortus virB operon
por: Ugalde, Rodolfo Augusto
Publicado: (2004)

Integration host factor is involved in transcriptional regulation of the Brucella abortus virB operon
por: Sieira, R., et al.
Publicado: (2004)

Integration host factor is involved in transcriptional regulation of the Brucella abortus virB operon
por: Sieira, R., et al.

Integration host factor is involved in transcriptional regulation of the Brucella abortus virB operon
por: Sieira, R., et al.
Publicado: (2004)

NF-κB transcriptional activity is modulated by FK506-Binding proteins FKBP51 and FKBP52:A role for peptidyl-prolyl isomerase activity
por: Fontana, Vanina Andrea
Publicado: (2014)

NF-κB transcriptional activity is modulated by FK506-Binding proteins FKBP51 and FKBP52:A role for peptidyl-prolyl isomerase activity
por: Erlejman, A.G., et al.

Interplay between the transcription factors acting on the GATA- and GABA-responsive elements of Saccharomyces cerevisiae UGA promoters
por: Cardillo, Sabrina Beatriz
Publicado: (2012)

Interplay between the transcription factors acting on the GATA- and GABA-responsive elements of Saccharomyces cerevisiae UGA promoters
por: Cardillo, S.B., et al.

Genomic analysis reveals novel connections between alternative splicing and circadian regulatory networks
por: Perez Santángelo, Soledad

Coupling of transcription with alternative splicing: RNA pol II promoters modulate SF2/ASF and 9G8 effects on an exonic splicing enhancer
Publicado: (1999)

Coupling of transcription with alternative splicing: RNA pol II promoters modulate SF2/ASF and 9G8 effects on an exonic splicing enhancer
por: Cramer, P., et al.

Mapping the Dynamics of the Glucocorticoid Receptor within the Nuclear Landscape
Publicado: (2017)

Mapping the Dynamics of the Glucocorticoid Receptor within the Nuclear Landscape
por: Stortz, M., et al.

Ion channels formed by transcription factors recognize consensus DNA sequences
Publicado: (2001)

Ion channels formed by transcription factors recognize consensus DNA sequences
por: Tosteson, M.T., et al.

Emerging roles of ATF2 and the dynamic AP1 network in cancer
Publicado: (2010)

Emerging roles of ATF2 and the dynamic AP1 network in cancer
por: Lopez-Bergami, P., et al.

Genomics
Publicado: (2007)

Probabilistic algorithm for computed tomography
por: Clausse, Alejandro, et al.
Publicado: (2001)

Efficient computation of all perfect repeats in genomic sequences of up to half a gigabyte, with a case study on the human genome
por: Becher, Verónica Andrea, et al.
Publicado: (2009)